STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_01463TRUD domain-containing protein. (778 aa)    
Predicted Functional Partners:
W97_03243
Ribosomal_L18e/L15P domain-containing protein.
   
   0.920
W97_03672
CP-type G domain-containing protein.
   
   0.916
W97_04533
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
   0.916
W97_02140
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.911
W97_00814
Uncharacterized protein.
   
   0.908
W97_07440
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
   0.907
W97_09008
L51_S25_CI-B8 domain-containing protein.
   
   0.907
W97_00384
Large subunit ribosomal protein L26e.
    
   0.905
W97_02147
Uncharacterized protein.
    
   0.905
W97_04655
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.905
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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