STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_01816Uncharacterized protein; Belongs to the DapA family. (330 aa)    
Predicted Functional Partners:
W97_05811
Uncharacterized protein.
 
      0.856
W97_08120
Aminotran_5 domain-containing protein.
   
 
 0.829
W97_07221
Aspartate aminotransferase.
   
 0.820
W97_01349
Uncharacterized protein; Belongs to the DapA family.
  
  
 
0.817
W97_05341
Aspartate aminotransferase.
   
  0.816
W97_07172
Tryptophan synthase.
    
  0.815
W97_05572
Malate synthase; Belongs to the malate synthase family.
   
 
 0.808
W97_05503
Uncharacterized protein.
   
 
  0.806
W97_07935
Isocitrate lyase.
   
 
  0.806
W97_06622
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.805
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.