STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_01939NmrA domain-containing protein. (330 aa)    
Predicted Functional Partners:
W97_00856
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.725
W97_08676
Reticulon-like protein.
    
  0.585
W97_03291
Uncharacterized protein.
 
      0.565
W97_02343
Uncharacterized protein.
     
 0.558
W97_07833
Uncharacterized protein.
    
  0.449
W97_03502
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
    
 0.433
W97_01524
Importin N-terminal domain-containing protein.
    
  0.413
W97_07504
Leukotriene A(4) hydrolase.
     
 0.412
W97_03094
Uncharacterized protein.
     
 0.405
W97_04056
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
 0.403
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.