STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_02036SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (176 aa)    
Predicted Functional Partners:
W97_00241
Ubiquitin-like domain-containing protein.
   
 0.999
W97_00451
Ubiquitin-like 1-activating enzyme E1 B.
   
 0.996
W97_05751
ThiF domain-containing protein.
  
 0.986
W97_07821
Uncharacterized protein.
   
 0.983
W97_05220
Uncharacterized protein.
    
 0.982
W97_06403
SP-RING-type domain-containing protein.
    
 0.978
W97_01196
Uncharacterized protein.
    
 0.975
W97_02527
Uncharacterized protein.
    
 0.975
W97_01125
Vezatin domain-containing protein.
   
 0.968
W97_01286
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.968
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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