STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_0223520S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (466 aa)    
Predicted Functional Partners:
W97_00092
Atypical/RIO/RIO2 protein kinase.
   
 0.999
W97_03246
Uncharacterized protein.
   
 0.999
W97_03815
Bms1-type G domain-containing protein.
   
 0.999
W97_04972
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
 0.999
W97_05139
Uncharacterized protein.
   
 0.999
W97_06029
Pre-rRNA-processing protein PNO1.
   
 0.999
W97_01098
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
 0.998
W97_01315
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
  0.998
W97_01396
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 0.998
W97_01856
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.998
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.