STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_02736PHD-type domain-containing protein. (851 aa)    
Predicted Functional Partners:
W97_03247
SPRY domain-containing protein.
   
 0.921
W97_06479
Uncharacterized protein.
    
 0.917
W97_01314
Uncharacterized protein.
    
 0.908
W97_09255
WD_REPEATS_REGION domain-containing protein.
    
 0.898
W97_04237
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
   
 0.862
W97_02878
Uncharacterized protein.
   
 
 0.778
W97_07432
WD_REPEATS_REGION domain-containing protein.
    
   0.743
W97_08514
Uncharacterized protein.
    
 
 0.676
W97_04462
Uncharacterized protein; Belongs to the actin family.
    
 
 0.643
W97_06885
SWIB domain-containing protein.
    
 
 0.639
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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