STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_02704Epimerase domain-containing protein. (343 aa)    
Predicted Functional Partners:
W97_01098
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 0.902
W97_04398
40S ribosomal protein S20.
   
  0.894
W97_02774
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.893
W97_01564
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.892
W97_02759
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.892
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.890
W97_05423
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.883
W97_06484
40S ribosomal protein S19.
   
 0.883
W97_02017
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.882
W97_01315
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
  0.879
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.