STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_02719Uncharacterized protein. (71 aa)    
Predicted Functional Partners:
W97_00500
Pre-mRNA-splicing factor cef1.
   
   0.906
W97_02806
Uncharacterized protein.
   
 0.766
W97_05316
PWI domain-containing protein.
   
 0.766
W97_09002
Uncharacterized protein.
   
 0.766
W97_09163
Uncharacterized protein.
   
 0.766
W97_02626
Uncharacterized protein.
   
  0.755
W97_01877
WD_REPEATS_REGION domain-containing protein.
    
  0.745
W97_01299
C2H2-type domain-containing protein.
   
  0.730
W97_04040
CMGC/DYRK/PRP4 protein kinase.
   
 0.710
W97_03511
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.709
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.