W97_03468 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_03468

Uncharacterized protein. (346 aa)

Predicted Functional Partners:

W97_03154

0.977

W97_08346

0.913

W97_08869

0.913

W97_03778

0.884

W97_07230

0.884

W97_08444

0.884

W97_09100

0.884

W97_04226

0.881

W97_06455

0.840

W97_05312

0.817

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_03154	W97_03468	R7YQH1	R7YQQ3	Uncharacterized protein.	Uncharacterized protein.	0.977
W97_03154	W97_03778	R7YQH1	R7YRL2	Uncharacterized protein.	SH3 domain-containing protein; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity.	0.796
W97_03154	W97_05312	R7YQH1	R7YW87	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.969
W97_03154	W97_06455	R7YQH1	R7YZ73	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.999
W97_03154	W97_07230	R7YQH1	R7Z1R5	Uncharacterized protein.	HMG box domain-containing protein.	0.872
W97_03154	W97_08346	R7YQH1	R7Z4K0	Uncharacterized protein.	Polyubiquitin.	0.981
W97_03154	W97_08444	R7YQH1	R7Z5J2	Uncharacterized protein.	Uncharacterized protein.	0.872
W97_03154	W97_08869	R7YQH1	R7Z6J1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.948
W97_03154	W97_09100	R7YQH1	R7Z6N8	Uncharacterized protein.	BRCT domain-containing protein.	0.872
W97_03468	W97_03154	R7YQQ3	R7YQH1	Uncharacterized protein.	Uncharacterized protein.	0.977
W97_03468	W97_03778	R7YQQ3	R7YRL2	Uncharacterized protein.	SH3 domain-containing protein; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity.	0.884
W97_03468	W97_04226	R7YQQ3	R7YTI2	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.881
W97_03468	W97_05312	R7YQQ3	R7YW87	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.817
W97_03468	W97_06455	R7YQQ3	R7YZ73	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.840
W97_03468	W97_07230	R7YQQ3	R7Z1R5	Uncharacterized protein.	HMG box domain-containing protein.	0.884
W97_03468	W97_08346	R7YQQ3	R7Z4K0	Uncharacterized protein.	Polyubiquitin.	0.913
W97_03468	W97_08444	R7YQQ3	R7Z5J2	Uncharacterized protein.	Uncharacterized protein.	0.884
W97_03468	W97_08869	R7YQQ3	R7Z6J1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.913
W97_03468	W97_09100	R7YQQ3	R7Z6N8	Uncharacterized protein.	BRCT domain-containing protein.	0.884
W97_03778	W97_03154	R7YRL2	R7YQH1	SH3 domain-containing protein; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity.	Uncharacterized protein.	0.796