STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_03406Sorting nexin-4. (416 aa)    
Predicted Functional Partners:
W97_07602
PX domain-containing protein.
    
 0.983
W97_03404
Letm1 RBD domain-containing protein.
 
      0.799
W97_04622
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.769
W97_00548
Uncharacterized protein.
    
 
 0.767
W97_01081
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 0.761
W97_08121
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.735
W97_03502
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
 
    
 0.699
W97_05462
Vesicle-associated membrane protein 4.
    
 0.683
W97_05985
ULK/ULK protein kinase.
   
 
 0.680
W97_04971
Uncharacterized protein.
    
 
 0.667
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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