W97_03436 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_03436

Uncharacterized protein. (203 aa)

Predicted Functional Partners:

W97_00321

0.622

W97_01986

0.622

W97_01102

0.566

W97_05902

0.566

W97_05129

0.556

W97_07204

0.543

W97_00596

0.427

W97_06706

0.427

W97_03910

0.406

W97_03909

0.406

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00321	W97_03436	R7YGU2	R7YRD8	NFACT-R_1 domain-containing protein.	Uncharacterized protein.	0.622
W97_00596	W97_01102	R7YHJ4	R7YJA0	Uncharacterized protein.	Uncharacterized protein.	0.537
W97_00596	W97_03436	R7YHJ4	R7YRD8	Uncharacterized protein.	Uncharacterized protein.	0.427
W97_00596	W97_03909	R7YHJ4	R7YSR0	Uncharacterized protein.	GTP-binding protein ypt2.	0.707
W97_00596	W97_03910	R7YHJ4	R7YRY1	Uncharacterized protein.	Uncharacterized protein.	0.707
W97_00596	W97_05129	R7YHJ4	R7YVF3	Uncharacterized protein.	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.624
W97_00596	W97_05902	R7YHJ4	R7YYE0	Uncharacterized protein.	F-box domain-containing protein.	0.516
W97_00596	W97_06706	R7YHJ4	R7YZX3	Uncharacterized protein.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.512
W97_00596	W97_07204	R7YHJ4	R7Z2B8	Uncharacterized protein.	Uncharacterized protein.	0.487
W97_01102	W97_00596	R7YJA0	R7YHJ4	Uncharacterized protein.	Uncharacterized protein.	0.537
W97_01102	W97_03436	R7YJA0	R7YRD8	Uncharacterized protein.	Uncharacterized protein.	0.566
W97_01102	W97_03909	R7YJA0	R7YSR0	Uncharacterized protein.	GTP-binding protein ypt2.	0.835
W97_01102	W97_03910	R7YJA0	R7YRY1	Uncharacterized protein.	Uncharacterized protein.	0.835
W97_01102	W97_05129	R7YJA0	R7YVF3	Uncharacterized protein.	Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.999
W97_01102	W97_06706	R7YJA0	R7YZX3	Uncharacterized protein.	ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.	0.537
W97_01102	W97_07204	R7YJA0	R7Z2B8	Uncharacterized protein.	Uncharacterized protein.	0.999
W97_01986	W97_03436	R7YM96	R7YRD8	Uncharacterized protein.	Uncharacterized protein.	0.622
W97_03436	W97_00321	R7YRD8	R7YGU2	Uncharacterized protein.	NFACT-R_1 domain-containing protein.	0.622
W97_03436	W97_00596	R7YRD8	R7YHJ4	Uncharacterized protein.	Uncharacterized protein.	0.427
W97_03436	W97_01102	R7YRD8	R7YJA0	Uncharacterized protein.	Uncharacterized protein.	0.566