W97_03660 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_03660

Uncharacterized protein. (118 aa)

Predicted Functional Partners:

W97_07912

0.912

W97_04816

0.899

W97_05086

0.899

W97_05771

0.899

W97_00391

0.831

W97_01740

0.828

W97_00960

0.824

W97_09180

0.824

W97_05288

0.821

W97_07164

0.818

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00391	W97_00960	R7YHB0	R7YIX4	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.701
W97_00391	W97_01740	R7YHB0	R7YKS7	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.644
W97_00391	W97_03660	R7YHB0	R7YRJ2	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.831
W97_00391	W97_04816	R7YHB0	R7YUQ4	Deacetylase sirtuin-type domain-containing protein.	Histone H3; Belongs to the histone H3 family.	0.783
W97_00391	W97_05086	R7YHB0	R7YVK4	Deacetylase sirtuin-type domain-containing protein.	Chromo domain-containing protein.	0.401
W97_00391	W97_05288	R7YHB0	R7YVV0	Deacetylase sirtuin-type domain-containing protein.	SET domain-containing protein.	0.438
W97_00391	W97_05771	R7YHB0	R7YXZ1	Deacetylase sirtuin-type domain-containing protein.	Histone domain-containing protein.	0.783
W97_00391	W97_07164	R7YHB0	R7Z1I8	Deacetylase sirtuin-type domain-containing protein.	SET domain-containing protein.	0.672
W97_00391	W97_07912	R7YHB0	R7Z3R9	Deacetylase sirtuin-type domain-containing protein.	Chromo domain-containing protein.	0.401
W97_00391	W97_09180	R7YHB0	R7Z7J2	Deacetylase sirtuin-type domain-containing protein.	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	0.638
W97_00960	W97_00391	R7YIX4	R7YHB0	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	Deacetylase sirtuin-type domain-containing protein.	0.701
W97_00960	W97_01740	R7YIX4	R7YKS7	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	Uncharacterized protein.	0.857
W97_00960	W97_03660	R7YIX4	R7YRJ2	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	Uncharacterized protein.	0.824
W97_00960	W97_04816	R7YIX4	R7YUQ4	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	Histone H3; Belongs to the histone H3 family.	0.978
W97_00960	W97_05086	R7YIX4	R7YVK4	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	Chromo domain-containing protein.	0.676
W97_00960	W97_05288	R7YIX4	R7YVV0	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	SET domain-containing protein.	0.792
W97_00960	W97_05771	R7YIX4	R7YXZ1	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	Histone domain-containing protein.	0.978
W97_00960	W97_07164	R7YIX4	R7Z1I8	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	SET domain-containing protein.	0.852
W97_00960	W97_07912	R7YIX4	R7Z3R9	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	Chromo domain-containing protein.	0.676
W97_00960	W97_09180	R7YIX4	R7Z7J2	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	Histone-lysine N-methyltransferase, H3 lysine-79 specific; Histone methyltransferase that specifically methylates histone H3 to form H3K79me. This methylation is required for telomere silencing and for the pachytene checkpoint during the meiotic cell cycle by allowing the recruitment of RAD9 to double strand breaks. Nucleosomes are preferred as substrate compared to free histones.	0.934