STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_03826PHD-type domain-containing protein. (527 aa)    
Predicted Functional Partners:
W97_01740
Uncharacterized protein.
   
 0.979
W97_05292
WD_REPEATS_REGION domain-containing protein.
   
 0.972
W97_02361
WD_REPEATS_REGION domain-containing protein.
   
 0.937
W97_00929
VEFS-Box domain-containing protein.
   
 0.929
W97_00930
Uncharacterized protein.
   
 0.929
W97_03827
Uncharacterized protein.
 
      0.826
W97_02158
Uncharacterized protein.
    
 0.806
W97_04986
JmjC domain-containing protein.
    
 0.806
W97_00835
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.788
W97_03129
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.776
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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