STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_03894CFEM domain-containing protein. (157 aa)    
Predicted Functional Partners:
W97_01805
Uncharacterized protein.
   
  0.573
W97_08174
Uncharacterized protein.
    
  0.539
W97_02167
Uncharacterized protein.
    
  0.536
W97_02036
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.500
W97_02315
Urea carboxylase.
    
  0.479
W97_08920
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
  0.475
W97_05881
Uncharacterized protein.
    
  0.472
W97_05144
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.457
W97_05578
Uncharacterized protein.
    
  0.457
W97_03804
MRG domain-containing protein.
    
  0.443
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.