STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_04153Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (464 aa)    
Predicted Functional Partners:
W97_07064
60S ribosomal protein L7.
  
 
 0.956
W97_00571
60S ribosomal protein L35.
  
 
 0.952
W97_03312
60S ribosomal protein L5.
  
 
 0.949
W97_00384
Large subunit ribosomal protein L26e.
  
   0.946
W97_05790
Large subunit ribosomal protein L23Ae.
  
 
 0.936
W97_02774
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.925
W97_01098
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.905
W97_05598
Uncharacterized protein.
  
   0.904
W97_03667
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
   0.872
W97_06502
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
   0.872
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.