STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_04376DNA_binding_1 domain-containing protein. (300 aa)    
Predicted Functional Partners:
W97_03512
N-glycosylase/DNA lyase.
  
 
 0.636
W97_02069
ENDO3c domain-containing protein.
  
 
 0.573
W97_00083
DNA mismatch repair protein MLH1.
   
 
 0.539
W97_06311
Alkyl transferase; Belongs to the UPP synthase family.
      
 0.534
W97_01825
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.526
W97_06154
XPGI domain-containing protein.
   
 
 0.504
W97_04788
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
   
 
 0.459
W97_07277
Fe2OG dioxygenase domain-containing protein.
  
  
 0.450
W97_05621
DNA polymerase.
   
 
 0.447
W97_05798
XPA_C domain-containing protein.
    
 
 0.428
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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