W97_04780 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_04780

Prohibitin. (312 aa)

Predicted Functional Partners:

W97_08827

0.999

W97_06476

0.943

W97_08576

0.893

W97_09038

0.888

W97_08377

0.831

W97_09246

0.816

W97_06699

0.805

W97_00398

0.780

W97_05421

0.761

W97_02179

0.736

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00398	W97_02179	R7YHS9	R7YM57	PHB domain-containing protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.699
W97_00398	W97_04780	R7YHS9	R7YUG2	PHB domain-containing protein.	Prohibitin.	0.780
W97_00398	W97_06476	R7YHS9	R7YZG4	PHB domain-containing protein.	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.690
W97_00398	W97_06699	R7YHS9	R7YZQ8	PHB domain-containing protein.	Rhomboid domain-containing protein.	0.764
W97_00398	W97_08377	R7YHS9	R7Z4X8	PHB domain-containing protein.	AAA domain-containing protein.	0.837
W97_00398	W97_08576	R7YHS9	R7Z5W3	PHB domain-containing protein.	AFG3 family protein.	0.711
W97_00398	W97_08827	R7YHS9	R7Z5Y2	PHB domain-containing protein.	Prohibitin.	0.792
W97_00398	W97_09038	R7YHS9	R7Z6F7	PHB domain-containing protein.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.657
W97_00398	W97_09246	R7YHS9	R7Z7R3	PHB domain-containing protein.	Mitochondrial processing peptidase; Belongs to the peptidase M16 family.	0.661
W97_02179	W97_00398	R7YM57	R7YHS9	Uncharacterized protein; Belongs to the AAA ATPase family.	PHB domain-containing protein.	0.699
W97_02179	W97_04780	R7YM57	R7YUG2	Uncharacterized protein; Belongs to the AAA ATPase family.	Prohibitin.	0.736
W97_02179	W97_05421	R7YM57	R7YWA2	Uncharacterized protein; Belongs to the AAA ATPase family.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.434
W97_02179	W97_06476	R7YM57	R7YZG4	Uncharacterized protein; Belongs to the AAA ATPase family.	Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.	0.652
W97_02179	W97_06699	R7YM57	R7YZQ8	Uncharacterized protein; Belongs to the AAA ATPase family.	Rhomboid domain-containing protein.	0.471
W97_02179	W97_08827	R7YM57	R7Z5Y2	Uncharacterized protein; Belongs to the AAA ATPase family.	Prohibitin.	0.699
W97_02179	W97_09038	R7YM57	R7Z6F7	Uncharacterized protein; Belongs to the AAA ATPase family.	Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.511
W97_02179	W97_09246	R7YM57	R7Z7R3	Uncharacterized protein; Belongs to the AAA ATPase family.	Mitochondrial processing peptidase; Belongs to the peptidase M16 family.	0.582
W97_04780	W97_00398	R7YUG2	R7YHS9	Prohibitin.	PHB domain-containing protein.	0.780
W97_04780	W97_02179	R7YUG2	R7YM57	Prohibitin.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.736
W97_04780	W97_05421	R7YUG2	R7YWA2	Prohibitin.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.761