STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_04746Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (586 aa)    
Predicted Functional Partners:
W97_03450
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.992
W97_07605
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
 
 0.988
W97_00922
Uncharacterized protein.
  
 
 0.923
W97_05647
Amino_oxidase domain-containing protein.
   
 
 0.858
W97_03295
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
  0.827
W97_02884
DAO domain-containing protein.
    
  0.809
W97_04822
Uroporphyrinogen-III synthase.
  
 
 0.803
W97_04745
Uncharacterized protein.
 
  
   0.782
W97_04384
Uncharacterized protein.
    
  0.732
W97_00209
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
    
  0.715
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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