STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_04848zf-C3H1 domain-containing protein. (1437 aa)    
Predicted Functional Partners:
W97_08124
DEAD-box superfamily nuclear exosomal RNA helicase MTR4.
    
 
 0.956
W97_01400
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.948
W97_05927
Uncharacterized protein.
   
 
 0.836
W97_04593
Uncharacterized protein.
    
 
 0.803
W97_02298
Uncharacterized protein.
    
 
 0.782
W97_04592
Uncharacterized protein.
    
 
 0.782
W97_08496
Uncharacterized protein.
   
 
 0.683
W97_01313
SF3b1 domain-containing protein.
   
    0.668
W97_02035
RRM domain-containing protein.
    
 
 0.664
W97_04468
HRDC domain-containing protein.
   
 
 0.638
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.