STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_05117WD_REPEATS_REGION domain-containing protein. (596 aa)    
Predicted Functional Partners:
W97_03969
TPR_REGION domain-containing protein.
    
 0.984
W97_03247
SPRY domain-containing protein.
    
 0.953
W97_06479
Uncharacterized protein.
   
0.953
W97_04237
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.951
W97_08945
Uncharacterized protein.
 
  
  0.930
W97_02964
NACHT domain-containing protein.
 
  
   0.893
W97_02473
BZIP domain-containing protein.
    
 0.888
W97_04816
Histone H3; Belongs to the histone H3 family.
    
 0.882
W97_05771
Histone domain-containing protein.
    
 0.882
W97_08346
Polyubiquitin.
 
  
  0.851
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.