STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_04824Uncharacterized protein. (570 aa)    
Predicted Functional Partners:
W97_07018
L-aminoadipate-semialdehyde dehydrogenase.
 
0.858
W97_04533
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
    
 
 0.855
W97_02140
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.854
W97_02147
Uncharacterized protein.
   
   0.854
W97_03243
Ribosomal_L18e/L15P domain-containing protein.
    
   0.854
W97_03630
MRP-L46 domain-containing protein.
    
   0.854
W97_07440
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
   0.854
W97_07519
Uncharacterized protein.
    
   0.854
W97_09008
L51_S25_CI-B8 domain-containing protein.
    
   0.854
W97_04655
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.837
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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