STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_05268UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (233 aa)    
Predicted Functional Partners:
W97_00346
Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family.
   
 0.984
W97_05780
E3 ubiquitin-protein ligase RBX1.
    
 0.978
W97_08346
Polyubiquitin.
   
 0.975
W97_02905
Ubiquitin-60S ribosomal protein L40.
   
 0.954
W97_02930
Cullin 1; Belongs to the cullin family.
    
 0.954
W97_02902
Uncharacterized protein.
   
 0.954
W97_03002
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.947
W97_00412
BZIP domain-containing protein.
    
  0.928
W97_00672
CIA30 domain-containing protein.
    
  0.928
W97_03010
Ubiquitin-40S ribosomal protein S27a.
    
  0.928
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.