STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_05383Uncharacterized protein. (652 aa)    
Predicted Functional Partners:
W97_08346
Polyubiquitin.
   
  0.668
W97_08869
Ubiquitin-like domain-containing protein.
   
  0.668
W97_07833
Uncharacterized protein.
    
  0.643
W97_00477
Uncharacterized protein.
    
  0.591
W97_01848
Uncharacterized protein.
    
  0.585
W97_02859
RBR-type E3 ubiquitin transferase.
    
  0.585
W97_04128
RBR-type E3 ubiquitin transferase.
    
  0.585
W97_07445
RBR-type E3 ubiquitin transferase.
    
  0.585
W97_07796
RBR-type E3 ubiquitin transferase.
    
  0.585
W97_02905
Ubiquitin-60S ribosomal protein L40.
    
  0.573
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.