STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_05269RanBD1 domain-containing protein. (609 aa)    
Predicted Functional Partners:
W97_06433
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.980
W97_08109
Exportin-1.
    
 
 0.952
W97_04075
Uncharacterized protein.
   
 0.946
W97_07492
Uncharacterized protein.
   
 0.938
W97_00844
Nup54 domain-containing protein.
   
 0.936
W97_00243
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.923
W97_08083
Uncharacterized protein.
   
 0.923
W97_06442
Nsp1_C domain-containing protein.
   
 0.912
W97_01196
Uncharacterized protein.
   
 0.910
W97_02527
Uncharacterized protein.
   
 0.910
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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