W97_05430 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_05430

Csm1 domain-containing protein. (559 aa)

Predicted Functional Partners:

W97_09007

0.897

W97_02245

0.856

W97_05420

0.824

W97_03597

0.581

W97_07270

0.580

W97_03567

0.561

W97_07522

0.556

W97_02221

0.538

W97_03543

0.538

W97_05720

0.520

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_02221	W97_05430	R7YM59	R7YX11	2Fe-2S ferredoxin-type domain-containing protein.	Csm1 domain-containing protein.	0.538
W97_02221	W97_07270	R7YM59	R7Z1V8	2Fe-2S ferredoxin-type domain-containing protein.	Cytochrome c oxidase subunit XV assembly protein.	0.782
W97_02221	W97_07522	R7YM59	R7Z2K9	2Fe-2S ferredoxin-type domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.772
W97_02245	W97_05430	R7YMH4	R7YX11	ULP_PROTEASE domain-containing protein.	Csm1 domain-containing protein.	0.856
W97_03543	W97_05430	R7YQX1	R7YX11	Lactamase_B domain-containing protein.	Csm1 domain-containing protein.	0.538
W97_03543	W97_07522	R7YQX1	R7Z2K9	Lactamase_B domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.772
W97_03567	W97_05430	R7YRP7	R7YX11	Uncharacterized protein.	Csm1 domain-containing protein.	0.561
W97_03597	W97_05430	R7YRR9	R7YX11	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Csm1 domain-containing protein.	0.581
W97_03597	W97_07522	R7YRR9	R7Z2K9	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.538
W97_05420	W97_05430	R7YX01	R7YX11	GPI ethanolamine phosphate transferase 1.	Csm1 domain-containing protein.	0.824
W97_05430	W97_02221	R7YX11	R7YM59	Csm1 domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.538
W97_05430	W97_02245	R7YX11	R7YMH4	Csm1 domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.856
W97_05430	W97_03543	R7YX11	R7YQX1	Csm1 domain-containing protein.	Lactamase_B domain-containing protein.	0.538
W97_05430	W97_03567	R7YX11	R7YRP7	Csm1 domain-containing protein.	Uncharacterized protein.	0.561
W97_05430	W97_03597	R7YX11	R7YRR9	Csm1 domain-containing protein.	3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.581
W97_05430	W97_05420	R7YX11	R7YX01	Csm1 domain-containing protein.	GPI ethanolamine phosphate transferase 1.	0.824
W97_05430	W97_05720	R7YX11	R7YWP4	Csm1 domain-containing protein.	CK1/CK1/CK1-D protein kinase.	0.520
W97_05430	W97_07270	R7YX11	R7Z1V8	Csm1 domain-containing protein.	Cytochrome c oxidase subunit XV assembly protein.	0.580
W97_05430	W97_07522	R7YX11	R7Z2K9	Csm1 domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.556
W97_05430	W97_09007	R7YX11	R7Z6V6	Csm1 domain-containing protein.	Uncharacterized protein.	0.897