STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_05833Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (260 aa)    
Predicted Functional Partners:
W97_04423
RING-type domain-containing protein.
    
 0.994
W97_08243
Uncharacterized protein.
   
 0.991
W97_08114
Uncharacterized protein.
    
 0.991
W97_05170
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
    
  0.979
W97_05770
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
0.978
W97_01183
Uncharacterized protein.
    
 0.976
W97_01129
PRKCSH domain-containing protein.
    
 0.976
W97_05609
UBX domain-containing protein.
    
 0.968
W97_05839
Uncharacterized protein.
   
 
 0.963
W97_03489
Nuclear protein localization protein 4.
    
 
 0.956
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.