W97_06257 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_06257

Uncharacterized protein. (930 aa)

Predicted Functional Partners:

W97_04514

0.971

W97_02756

0.961

W97_00724

0.955

W97_00310

0.947

W97_00901

0.933

W97_03046

0.923

W97_08162

0.903

W97_01279

0.887

W97_00933

0.884

W97_03518

0.884

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00310	W97_00724	R7YH42	R7YI67	DHR10 domain-containing protein.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.633
W97_00310	W97_00901	R7YH42	R7YIF3	DHR10 domain-containing protein.	Uncharacterized protein.	0.564
W97_00310	W97_02756	R7YH42	R7YNU1	DHR10 domain-containing protein.	Uncharacterized protein.	0.452
W97_00310	W97_04514	R7YH42	R7YUC5	DHR10 domain-containing protein.	Uncharacterized protein.	0.999
W97_00310	W97_06257	R7YH42	R7YY31	DHR10 domain-containing protein.	Uncharacterized protein.	0.947
W97_00724	W97_00310	R7YI67	R7YH42	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	DHR10 domain-containing protein.	0.633
W97_00724	W97_00933	R7YI67	R7YIH3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.997
W97_00724	W97_01279	R7YI67	R7YJJ1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	CAP-Gly domain-containing protein.	0.543
W97_00724	W97_02756	R7YI67	R7YNU1	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.961
W97_00724	W97_03518	R7YI67	R7YQU8	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.997
W97_00724	W97_04514	R7YI67	R7YUC5	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.664
W97_00724	W97_06257	R7YI67	R7YY31	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Uncharacterized protein.	0.955
W97_00901	W97_00310	R7YIF3	R7YH42	Uncharacterized protein.	DHR10 domain-containing protein.	0.564
W97_00901	W97_00933	R7YIF3	R7YIH3	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.982
W97_00901	W97_01279	R7YIF3	R7YJJ1	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.465
W97_00901	W97_02756	R7YIF3	R7YNU1	Uncharacterized protein.	Uncharacterized protein.	0.930
W97_00901	W97_03518	R7YIF3	R7YQU8	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.982
W97_00901	W97_04514	R7YIF3	R7YUC5	Uncharacterized protein.	Uncharacterized protein.	0.642
W97_00901	W97_06257	R7YIF3	R7YY31	Uncharacterized protein.	Uncharacterized protein.	0.933
W97_00933	W97_00724	R7YIH3	R7YI67	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.997