STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_05955cobW domain-containing protein. (354 aa)    
Predicted Functional Partners:
W97_05598
Uncharacterized protein.
  
 
 0.810
W97_01875
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.738
W97_03928
Uncharacterized protein.
  
  
 0.716
W97_08453
50S ribosomal protein L33.
  
  
 0.634
W97_08609
tRNA-synt_1e domain-containing protein.
  
  
 0.510
W97_08697
Histidine biosynthesis trifunctional protein.
   
 
 0.461
W97_05354
cobW domain-containing protein.
  
     0.440
W97_05199
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
 
      0.416
W97_01790
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
  
 0.414
W97_00818
Amidohydro-rel domain-containing protein.
  
    0.407
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
Server load: low (18%) [HD]