STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_06144Hit family protein 1. (132 aa)    
Predicted Functional Partners:
W97_08470
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
  0.850
W97_03435
Uncharacterized protein.
    
 0.775
W97_05907
CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.
    
 0.775
W97_07245
CDK-activating kinase assembly factor MAT1.
    
 0.766
W97_04507
TATA-box-binding protein.
    
 0.764
W97_06976
Uncharacterized protein.
    
 0.764
W97_04392
Uncharacterized protein; Belongs to the complex I LYR family.
 
 
    0.747
W97_00547
Uncharacterized protein.
    
 0.710
W97_08209
SprT-like domain-containing protein.
    
 0.710
W97_07381
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.703
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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