STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_06544RNB domain-containing protein. (996 aa)    
Predicted Functional Partners:
W97_03654
Uncharacterized protein.
   
 0.943
W97_09135
Exosome complex subunit Csl4.
   
 0.943
W97_06646
RNase_PH domain-containing protein.
   
 0.942
W97_08011
RNase_PH domain-containing protein.
   
 0.941
W97_05710
Uncharacterized protein.
   
 0.939
W97_06928
ECR1_N domain-containing protein.
    
 0.937
W97_08832
RNase_PH domain-containing protein.
   
 0.937
W97_08440
Tr-type G domain-containing protein.
   
 0.929
W97_08124
DEAD-box superfamily nuclear exosomal RNA helicase MTR4.
   
 0.921
W97_07687
RNase_PH domain-containing protein.
   
 0.897
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.