STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_07167Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (234 aa)    
Predicted Functional Partners:
W97_02856
Elongation factor 3.
   
 
 0.990
W97_02147
Uncharacterized protein.
  
 0.989
W97_04533
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 0.989
W97_05531
Elongation factor EF-3.
   
 
 0.989
W97_07902
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
  
 0.986
W97_02140
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.985
W97_03667
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
 0.985
W97_05598
Uncharacterized protein.
  
 
 0.985
W97_07810
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.985
W97_01790
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.984
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.