STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_07613Uncharacterized protein. (382 aa)    
Predicted Functional Partners:
W97_03132
RRM domain-containing protein.
  
 
 0.758
W97_07339
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.722
W97_00079
T-complex protein 1 subunit alpha.
   
  0.687
W97_06239
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
0.686
W97_03870
Nuclear cap-binding protein subunit 2.
    
 0.672
W97_03067
Uncharacterized protein.
   
  0.659
W97_04803
RRM domain-containing protein.
  
 
 0.657
W97_05858
Uncharacterized protein.
    
 0.656
W97_02035
RRM domain-containing protein.
  
 
  0.647
W97_08696
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.647
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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