STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_07900Uncharacterized protein. (475 aa)    
Predicted Functional Partners:
W97_05144
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
  0.823
W97_05578
Uncharacterized protein.
    
  0.741
W97_05780
E3 ubiquitin-protein ligase RBX1.
    
 0.711
W97_02930
Cullin 1; Belongs to the cullin family.
    
  0.600
W97_03002
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.600
W97_04205
3'-5' exonuclease domain-containing protein.
      
 0.538
W97_00671
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.506
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.