STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_08260WD_REPEATS_REGION domain-containing protein. (358 aa)    
Predicted Functional Partners:
W97_01267
Uncharacterized protein.
   
 0.999
W97_03423
Elongation factor EF-2.
   
 0.999
W97_06513
Pre-mRNA-processing-splicing factor 8.
   
 0.999
W97_07420
Uncharacterized protein.
   
 0.999
W97_08539
Pre-mRNA-splicing ATP-dependent RNA helicase prp28.
    
 0.998
W97_00360
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
  0.996
W97_01877
WD_REPEATS_REGION domain-containing protein.
  
 
  
0.983
W97_03361
Small nuclear ribonucleoprotein Sm D2.
   
 0.981
W97_08972
Uncharacterized protein.
   
 
 0.981
W97_00500
Pre-mRNA-splicing factor cef1.
   
   0.980
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.