STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_08094Uncharacterized protein. (343 aa)    
Predicted Functional Partners:
W97_01891
Protein transporter SEC61 subunit alpha.
   
 0.960
W97_02223
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.882
W97_07270
Cytochrome c oxidase subunit XV assembly protein.
   
 
 0.864
W97_08062
SRP54 domain-containing protein.
   
 
 0.843
W97_07172
Tryptophan synthase.
   
  
 0.814
W97_00395
Uncharacterized protein.
   
 
 0.772
W97_04533
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.729
W97_01856
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.699
W97_00517
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.692
W97_02140
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.690
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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