STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_0828460S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family. (183 aa)    
Predicted Functional Partners:
W97_00280
60S ribosomal protein L9-B.
   
 
 0.999
W97_00340
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.999
W97_00571
60S ribosomal protein L35.
   
 0.999
W97_01514
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 0.999
W97_01564
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
W97_01315
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.999
W97_01856
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.999
W97_01987
Large subunit ribosomal protein L31e.
  
 
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.999
W97_02720
60S ribosomal protein L16.
   
 0.999
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.