W97_08418 protein (Coniosporium apollinis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W97_08418

Uncharacterized protein. (321 aa)

Predicted Functional Partners:

W97_01952

0.875

W97_01164

0.753

W97_01318

0.684

W97_01288

0.679

W97_04608

0.679

W97_00137

0.641

W97_00774

0.625

W97_05102

0.625

W97_09039

0.608

W97_04599

0.606

Your Current Organism:

Coniosporium apollinis

NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W97_00137	W97_00774	R7YG94	R7YID0	Pex2_Pex12 domain-containing protein.	Enoyl-CoA hydratase.	0.696
W97_00137	W97_01164	R7YG94	R7YJX0	Pex2_Pex12 domain-containing protein.	TPR_REGION domain-containing protein.	0.988
W97_00137	W97_01318	R7YG94	R7YJY1	Pex2_Pex12 domain-containing protein.	SH3 domain-containing protein.	0.964
W97_00137	W97_01952	R7YG94	R7YLH7	Pex2_Pex12 domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.984
W97_00137	W97_05102	R7YG94	R7YVA0	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.665
W97_00137	W97_08418	R7YG94	R7Z576	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.641
W97_00774	W97_00137	R7YID0	R7YG94	Enoyl-CoA hydratase.	Pex2_Pex12 domain-containing protein.	0.696
W97_00774	W97_01164	R7YID0	R7YJX0	Enoyl-CoA hydratase.	TPR_REGION domain-containing protein.	0.770
W97_00774	W97_01288	R7YID0	R7YJS9	Enoyl-CoA hydratase.	3HCDH domain-containing protein.	0.747
W97_00774	W97_01318	R7YID0	R7YJY1	Enoyl-CoA hydratase.	SH3 domain-containing protein.	0.693
W97_00774	W97_01952	R7YID0	R7YLH7	Enoyl-CoA hydratase.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.957
W97_00774	W97_04599	R7YID0	R7YUK1	Enoyl-CoA hydratase.	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.432
W97_00774	W97_04608	R7YID0	R7YTZ8	Enoyl-CoA hydratase.	3-hydroxybutyryl-CoA dehydrogenase.	0.747
W97_00774	W97_08418	R7YID0	R7Z576	Enoyl-CoA hydratase.	Uncharacterized protein.	0.625
W97_00774	W97_09039	R7YID0	R7Z773	Enoyl-CoA hydratase.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.462
W97_01164	W97_00137	R7YJX0	R7YG94	TPR_REGION domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.988
W97_01164	W97_00774	R7YJX0	R7YID0	TPR_REGION domain-containing protein.	Enoyl-CoA hydratase.	0.770
W97_01164	W97_01318	R7YJX0	R7YJY1	TPR_REGION domain-containing protein.	SH3 domain-containing protein.	0.987
W97_01164	W97_01952	R7YJX0	R7YLH7	TPR_REGION domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.999
W97_01164	W97_04599	R7YJX0	R7YUK1	TPR_REGION domain-containing protein.	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.693