STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_08610WD_REPEATS_REGION domain-containing protein. (266 aa)    
Predicted Functional Partners:
W97_08243
Uncharacterized protein.
 
 
    0.808
W97_01494
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.590
W97_06997
Utp12 domain-containing protein.
   
    0.577
W97_03009
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
    0.542
W97_01239
Brix domain-containing protein.
   
    0.513
W97_00581
Sas10 domain-containing protein.
   
    0.512
W97_08447
NUC153 domain-containing protein.
   
    0.487
W97_03246
Uncharacterized protein.
   
   0.439
W97_01076
CBF domain-containing protein.
   
    0.424
W97_04053
Uncharacterized protein.
   
    0.412
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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