STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_08494Uncharacterized protein. (1359 aa)    
Predicted Functional Partners:
W97_01313
SF3b1 domain-containing protein.
   
 0.984
W97_02604
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.984
W97_00990
PSP domain-containing protein.
   
 0.983
W97_03735
Uncharacterized protein.
   
 0.983
W97_05132
Uncharacterized protein.
   
 0.983
W97_06852
Uncharacterized protein.
   
 0.982
W97_03097
RRM domain-containing protein.
    
 0.981
W97_02208
C2H2-type domain-containing protein.
   
 0.976
W97_00089
Uncharacterized protein.
    
 0.974
W97_05297
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.974
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.