STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W97_09048GATA-type domain-containing protein. (286 aa)    
Predicted Functional Partners:
W97_00985
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.910
W97_08023
GATA-type domain-containing protein.
  
 
0.707
W97_08507
Uncharacterized protein.
    
 0.706
W97_07160
Uncharacterized protein.
    
 0.690
W97_07510
Hist_deacetyl domain-containing protein.
    
 0.680
W97_05455
MADS-box domain-containing protein.
    
 0.670
W97_03077
Uncharacterized protein.
    
 0.666
W97_03236
Uncharacterized protein.
    
 0.666
W97_08017
Uncharacterized protein.
    
 0.666
W97_02616
Uncharacterized protein.
  
 
 0.644
Your Current Organism:
Coniosporium apollinis
NCBI taxonomy Id: 1168221
Other names: C. apollinis CBS 100218, Coniosporium apollinis CBS 100218, Coniosporium apollinis CBS 352.97
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