STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000259075_01141Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000259075_01145
Unannotated protein.
     0.984
GCA_000259075_01140
Unannotated protein.
 
  
 0.955
GCA_000259075_01139
Unannotated protein.
 
     0.649
BY457_1521
Unannotated protein.
 
     0.619
GCA_000259075_01144
Unannotated protein.
 
     0.591
BY457_11958
Unannotated protein.
  
    0.586
GCA_000259075_01142
Unannotated protein.
 
     0.556
GCA_000259075_01143
Unannotated protein.
 
     0.544
GCA_000259075_01138
Unannotated protein.
       0.530
BY457_11723
Unannotated protein.
     
 0.509
Your Current Organism:
Marinilabilia salmonicolor
NCBI taxonomy Id: 1168289
Other names: M. salmonicolor JCM 21150, Marinilabilia salmonicolor IAM 14310, Marinilabilia salmonicolor JCM 21150, Marinilabilia salmonicolor NBRC 15948, Marinilabilia salmonicolor NCIMB 2216, Marinilabilia salmonicolor str. JCM 21150, Marinilabilia salmonicolor strain JCM 21150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.