STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BY457_108127Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (482 aa)    
Predicted Functional Partners:
BY457_11723
Unannotated protein.
  
 
 0.747
BY457_10273
Unannotated protein.
   
 
 0.735
BY457_101189
Unannotated protein.
  
  
 0.595
GCA_000259075_03966
Unannotated protein.
       0.550
BY457_11741
Unannotated protein.
     
 0.524
BY457_108118
Unannotated protein.
 
     0.505
BY457_10692
Unannotated protein.
   
 
 0.479
GCA_000259075_00582
Unannotated protein.
   
 
 0.479
BY457_1148
Unannotated protein.
   
 
 0.479
BY457_1147
Unannotated protein.
   
 
 0.479
Your Current Organism:
Marinilabilia salmonicolor
NCBI taxonomy Id: 1168289
Other names: M. salmonicolor JCM 21150, Marinilabilia salmonicolor IAM 14310, Marinilabilia salmonicolor JCM 21150, Marinilabilia salmonicolor NBRC 15948, Marinilabilia salmonicolor NCIMB 2216, Marinilabilia salmonicolor str. JCM 21150, Marinilabilia salmonicolor strain JCM 21150
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.