STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BX591_112139Unannotated protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (412 aa)    
Predicted Functional Partners:
mdh
Unannotated protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
    0.846
BX591_11653
Unannotated protein.
    
 
 0.618
GCA_000383275_01413
Unannotated protein.
  
  
 0.468
GCA_000383275_01844
Unannotated protein.
    
 
 0.433
GCA_000383275_03447
Unannotated protein.
    
 
 0.433
cmk
Unannotated protein.
  
    0.411
BX591_112138
Unannotated protein.
       0.407
BX591_102402
Unannotated protein.
 
 
 
0.407
Your Current Organism:
Paraburkholderia bryophila
NCBI taxonomy Id: 1169143
Other names: Burkholderia bryophila 376MFSha3.1, P. bryophila 376MFSha3.1, Paraburkholderia bryophila 376MFSha3.1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.