STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000482385_02565Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000482385_02566
Unannotated protein.
 
 
  0.978
GCA_000482385_02567
Unannotated protein.
 
     0.905
GCA_000482385_04225
Unannotated protein.
  
  
  0.872
GCA_000482385_02564
Unannotated protein.
 
     0.865
GCA_000482385_02568
Unannotated protein.
 
 
  0.844
GCA_000482385_03849
Unannotated protein.
 
  
 0.839
GCA_000482385_02570
Unannotated protein.
 
    0.764
GCA_000482385_02527
Unannotated protein.
  
     0.671
GCA_000482385_03468
Unannotated protein.
    
  0.622
GCA_000482385_03469
Unannotated protein.
    
  0.622
Your Current Organism:
Nocardia sp. CNY236
NCBI taxonomy Id: 1169152
Other names: N. sp. CNY236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.