STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000482385_03475Unannotated protein. (148 aa)    
Predicted Functional Partners:
GCA_000482385_02015
Unannotated protein.
 
  
 0.929
GCA_000482385_02019
Unannotated protein.
 
  
 0.928
GCA_000482385_03220
Unannotated protein.
  
  
  0.925
GCA_000482385_01928
Unannotated protein.
  
 
 0.695
GCA_000482385_03473
Unannotated protein.
       0.687
GCA_000482385_03474
Unannotated protein.
       0.687
GCA_000482385_00356
Unannotated protein.
 
 
  0.669
GCA_000482385_04475
Unannotated protein.
 
 
  0.667
GCA_000482385_01484
Unannotated protein.
 
 
  0.661
GCA_000482385_01430
Unannotated protein.
  
 
 0.649
Your Current Organism:
Nocardia sp. CNY236
NCBI taxonomy Id: 1169152
Other names: N. sp. CNY236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.