STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000482385_03711Unannotated protein. (74 aa)    
Predicted Functional Partners:
GCA_000482385_00484
Unannotated protein.
     
 0.786
GCA_000482385_00173
Unannotated protein.
   
 
  0.757
GCA_000482385_03742
Unannotated protein.
     
 0.658
GCA_000482385_03710
Unannotated protein.
       0.487
GCA_000482385_02851
Unannotated protein.
    
 0.461
GCA_000482385_03712
Unannotated protein.
       0.419
GCA_000482385_03713
Unannotated protein.
       0.419
Your Current Organism:
Nocardia sp. CNY236
NCBI taxonomy Id: 1169152
Other names: N. sp. CNY236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.