STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_6917Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
Vbra_22900
Uncharacterized protein.
  
 0.762
Vbra_736
Uncharacterized protein.
    
 0.756
Vbra_18040
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.715
Vbra_18123
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
0.682
Vbra_7231
Uncharacterized protein.
   
 0.676
Vbra_20562
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
0.671
Vbra_15299
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.628
Vbra_3010
Uncharacterized protein.
   
 0.612
Vbra_17410
Uncharacterized protein.
    
  0.611
Vbra_1722
Uncharacterized protein.
   
 0.589
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
Server load: low (22%) [HD]