STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_4742Protein kinase domain-containing protein. (562 aa)    
Predicted Functional Partners:
Vbra_2617
Uncharacterized protein.
    
 0.812
Vbra_16748
Uncharacterized protein.
    
 0.769
Vbra_7071
RIO domain-containing protein.
    
 0.760
Vbra_16657
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
 0.678
Vbra_10757
Uncharacterized protein.
    
 0.671
Vbra_16669
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
 0.657
Vbra_4138
Protein kinase domain-containing protein.
  
 
 0.640
Vbra_19645
Uncharacterized protein.
    
  0.629
Vbra_18517
Protein kinase domain-containing protein.
  
 
 0.627
Vbra_6540
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.610
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
Server load: low (14%) [HD]