STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_7059Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (925 aa)    
Predicted Functional Partners:
Vbra_11177
Uncharacterized protein.
   
 0.813
Vbra_18762
Ubiquitin carboxyl-terminal hydrolase.
    
 0.746
Vbra_5443
WD_REPEATS_REGION domain-containing protein.
    
 0.566
Vbra_22085
WD_REPEATS_REGION domain-containing protein.
    
 0.545
Vbra_578
Uncharacterized protein.
    
 0.517
Vbra_17487
Uncharacterized protein.
    
 0.494
Vbra_19185
Uncharacterized protein.
    
  0.492
Vbra_11391
IFT81_CH domain-containing protein.
    
 0.482
Vbra_14572
ANAPC4_WD40 domain-containing protein.
     
 0.468
Vbra_843
Uncharacterized protein.
     
 0.466
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.