STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vbra_22474NAD(P)-bd_dom domain-containing protein. (277 aa)    
Predicted Functional Partners:
Vbra_20035
Uncharacterized protein.
   
 0.836
Vbra_21749
Cytochrome c domain-containing protein.
   
 0.836
Vbra_4440
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.823
Vbra_16702
Carrier domain-containing protein.
   
 0.823
Vbra_7409
Rieske domain-containing protein.
  
 0.812
Vbra_13677
Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
  
 0.812
Vbra_1550
Rieske domain-containing protein.
  
 0.812
Vbra_11389
Uncharacterized protein.
   
  0.795
Vbra_14630
Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family.
   
  0.787
Vbra_14312
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 0.725
Your Current Organism:
Vitrella brassicaformis
NCBI taxonomy Id: 1169540
Other names: V. brassicaformis CCMP3155, Vitrella brassicaformis CCMP3155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.